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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ10F01_PFZ10F01, a Beagle
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ10F01_PFZ10F01

PFZ10F01_PFZ10F01 is a Beagle from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ10F01_PFZ10F01 in the atlas
About PFZ10F01_PFZ10F01

PFZ10F01_PFZ10F01 sits near the center of the Beagle cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ10F01_PFZ10F01's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ10F01_PFZ10F01's. Click any of them to keep exploring.

  1. PFZ43G08_PFZ43G08 Beagle 16.75
  2. PFZ10A01_PFZ10A01 Beagle 16.84
  3. Bgl_GT9_Bgl_GT9 Beagle 17.19
  4. PFZ10B01_PFZ10B01 Beagle 17.52
  5. PFZ10C01_PFZ10C01 Beagle 17.57
PFZ10F01_PFZ10F01's breed

PFZ10F01_PFZ10F01 sits in the Beagle cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Beagle 88%
  2. Golden Retriever 6%
  3. Labrador Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Beagle.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.870
y 5.537
z 3.883
PCA-256 distance from breed centroid
20.40
Outlier percentile in breed
15
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ10F01_PFZ10F01 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC47 z = 7.96
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC70 z = 6.53
  • chr13:1,243,516 loading 0.0318
  • chr13:1,443,325 loading -0.0301
  • chr18:21,034,428 loading 0.0292
PC42 z = -6.11
  • chr14:22,119,741 loading 0.0316
  • chr5:79,283,975 loading -0.0300
  • chr5:64,357,114 loading -0.0296
Ancestry reconstruction error: 0.23
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