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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ12A06_PFZ12A06, a Bichon Frise
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ12A06_PFZ12A06

PFZ12A06_PFZ12A06 is a Bichon Frise from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ12A06_PFZ12A06 in the atlas
About PFZ12A06_PFZ12A06

PFZ12A06_PFZ12A06 sits well inside the Bichon Frise cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ12A06_PFZ12A06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ12A06_PFZ12A06's. Click any of them to keep exploring.

  1. PFZ10G01_PFZ10G01 Bichon Frise 18.76
  2. PFZ13E09_PFZ13E09 Bichon Frise 19.15
  3. PFZ13G12_PFZ13G12 Bichon Frise 19.22
  4. PFZ14G09_PFZ14G09 Bichon Frise 19.64
  5. PFZ1D09_PFZ1D09 Bichon Frise 20.02
PFZ12A06_PFZ12A06's breed

PFZ12A06_PFZ12A06 sits in the Bichon Frise cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Bichon Frise 80%
  2. Golden Retriever 12%
  3. Labrador Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Bichon Frise.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.482
y -5.965
z 5.364
PCA-256 distance from breed centroid
28.62
Outlier percentile in breed
38
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ12A06_PFZ12A06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC145 z = -4.98
  • chr19:19,197,831 loading 0.0370
  • chr1:99,774,502 loading -0.0342
  • chr4:60,708,893 loading 0.0329
PC110 z = -3.91
  • chr25:1,742,133 loading 0.0401
  • chr28:2,607,542 loading 0.0393
  • chr25:1,819,027 loading 0.0392
PC154 z = -3.90
  • chr34:1,972,619 loading 0.0431
  • chr34:1,533,247 loading 0.0397
  • chr34:2,125,452 loading 0.0365
Ancestry reconstruction error: 0.43
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