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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ13D09_PFZ13D09, a Bichon Frise
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ13D09_PFZ13D09

PFZ13D09_PFZ13D09 is a Bichon Frise from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ13D09_PFZ13D09 in the atlas
About PFZ13D09_PFZ13D09

PFZ13D09_PFZ13D09 sits near the center of the Bichon Frise cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ13D09_PFZ13D09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ13D09_PFZ13D09's. Click any of them to keep exploring.

  1. PFZ10G01_PFZ10G01 Bichon Frise 16.80
  2. PFZ14G09_PFZ14G09 Bichon Frise 17.01
  3. PFZ13G12_PFZ13G12 Bichon Frise 18.42
  4. PFZ13C10_PFZ13C10 Bichon Frise 18.51
  5. PFZ13G11_PFZ13G11 Bichon Frise 18.61
PFZ13D09_PFZ13D09's breed

PFZ13D09_PFZ13D09 sits in the Bichon Frise cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Bichon Frise 81%
  2. Golden Retriever 12%
  3. Labrador Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Bichon Frise.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.514
y -6.002
z 5.397
PCA-256 distance from breed centroid
27.50
Outlier percentile in breed
13
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ13D09_PFZ13D09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC110 z = -3.73
  • chr25:1,742,133 loading 0.0401
  • chr28:2,607,542 loading 0.0393
  • chr25:1,819,027 loading 0.0392
PC145 z = -3.52
  • chr19:19,197,831 loading 0.0370
  • chr1:99,774,502 loading -0.0342
  • chr4:60,708,893 loading 0.0329
PC147 z = 3.44
  • chr20:14,856,460 loading 0.0316
  • chr10:6,497,921 loading 0.0302
  • chr10:6,396,863 loading 0.0301
Ancestry reconstruction error: 0.42
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