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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ14D07_PFZ14D07, a English Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ14D07_PFZ14D07

PFZ14D07_PFZ14D07 is a English Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ14D07_PFZ14D07 in the atlas
About PFZ14D07_PFZ14D07

PFZ14D07_PFZ14D07 is a notable English Setter - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ14D07_PFZ14D07's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ14D07_PFZ14D07's. Click any of them to keep exploring.

  1. PFZ15C01_PFZ15C01 English Setter 20.02
  2. PFZ14D05_PFZ14D05 English Setter 20.94
  3. PFZ15F05_PFZ15F05 English Setter 22.54
  4. ESt_GT165_ESt_GT165 English Setter 27.66
  5. ES67_ES67 English Setter 28.15
PFZ14D07_PFZ14D07's breed

PFZ14D07_PFZ14D07 sits in the English Setter cluster, with genome overlap to Gordon Setter, Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 50%
  2. Gordon Setter 28%
  3. Golden Retriever 12%
  4. Labrador Retriever 10%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: English Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.317
y -2.598
z -2.508
PCA-256 distance from breed centroid
53.96
Outlier percentile in breed
85
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ14D07_PFZ14D07 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC148 z = -2.80
  • chr6:30,769,727 loading 0.0436
  • chr1:62,992,483 loading -0.0356
  • chr6:30,876,588 loading -0.0355
PC9 z = -2.79
  • chr3:66,503,138 loading 0.0243
  • chr29:24,433,584 loading 0.0237
  • chr21:33,291,005 loading 0.0234
PC183 z = -2.77
  • chr23:32,351,248 loading 0.0384
  • chr7:40,629,884 loading 0.0327
  • chr21:33,590,242 loading -0.0320
Ancestry reconstruction error: 0.63