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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ15F05_PFZ15F05, a English Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ15F05_PFZ15F05

PFZ15F05_PFZ15F05 is a English Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ15F05_PFZ15F05 in the atlas
About PFZ15F05_PFZ15F05

PFZ15F05_PFZ15F05 sits at the edge of the English Setter cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ15F05_PFZ15F05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ15F05_PFZ15F05's. Click any of them to keep exploring.

  1. PFZ15C01_PFZ15C01 English Setter 19.18
  2. PFZ14D05_PFZ14D05 English Setter 19.34
  3. PFZ14D07_PFZ14D07 English Setter 22.54
  4. ESt_GT161_ESt_GT161 English Setter 25.09
  5. ESt_GT165_ESt_GT165 English Setter 25.27
PFZ15F05_PFZ15F05's breed

PFZ15F05_PFZ15F05 sits in the English Setter cluster, with genome overlap to Gordon Setter, Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 57%
  2. Gordon Setter 22%
  3. Labrador Retriever 11%
  4. Golden Retriever 10%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: English Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.294
y -2.588
z -2.543
PCA-256 distance from breed centroid
47.75
Outlier percentile in breed
74
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ15F05_PFZ15F05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC209 z = -3.59
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC9 z = -3.44
  • chr3:66,503,138 loading 0.0243
  • chr29:24,433,584 loading 0.0237
  • chr21:33,291,005 loading 0.0234
PC164 z = -2.71
  • chr19:16,549,845 loading 0.0354
  • chr28:2,607,542 loading -0.0326
  • chr28:1,724,663 loading 0.0325
Ancestry reconstruction error: 0.59