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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ19F09_PFZ19F09, a Scottish Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ19F09_PFZ19F09

PFZ19F09_PFZ19F09 is a Scottish Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ19F09_PFZ19F09 in the atlas
About PFZ19F09_PFZ19F09

PFZ19F09_PFZ19F09 sits at the edge of the Scottish Terrier cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ19F09_PFZ19F09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ19F09_PFZ19F09's. Click any of them to keep exploring.

  1. PFZ37C06_PFZ37C06 Scottish Terrier 14.42
  2. PFZ18D04_PFZ18D04 Scottish Terrier 14.65
  3. PFZ37H06_PFZ37H06 Scottish Terrier 14.98
  4. PFZ37C07_PFZ37C07 Scottish Terrier 15.49
  5. PFZ37A06_PFZ37A06 Scottish Terrier 15.70
PFZ19F09_PFZ19F09's breed

PFZ19F09_PFZ19F09 sits in the Scottish Terrier cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Scottish Terrier 87%
  2. Golden Retriever 7%
  3. Labrador Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Scottish Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -1.270
y 10.452
z -0.018
PCA-256 distance from breed centroid
20.84
Outlier percentile in breed
52
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ19F09_PFZ19F09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC54 z = -13.03
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC55 z = -8.65
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC51 z = -8.07
  • chr22:9,968,688 loading 0.0380
  • chr4:22,144,820 loading 0.0322
  • chr26:21,017,529 loading 0.0321
Ancestry reconstruction error: 0.16
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