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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ24A11_PFZ24A11, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ24A11_PFZ24A11

PFZ24A11_PFZ24A11 is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ24A11_PFZ24A11 in the atlas
About PFZ24A11_PFZ24A11

PFZ24A11_PFZ24A11 sits at the edge of the Boxer cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ24A11_PFZ24A11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ24A11_PFZ24A11's. Click any of them to keep exploring.

  1. PFZ41F04_PFZ41F04 Boxer 14.59
  2. PFZ33B03_PFZ33B03 Boxer 14.71
  3. D2-HUC21-MALE-3002_D2-HUC21-MALE-3002 Boxer 14.72
  4. PFZ24H09_PFZ24H09 Boxer 14.98
  5. Toby_Toby Boxer 15.14
PFZ24A11_PFZ24A11's breed

PFZ24A11_PFZ24A11 sits in the Boxer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 89%
  2. Labrador Retriever 6%
  3. Golden Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 T/T
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.069
y 0.577
z -2.231
PCA-256 distance from breed centroid
20.01
Outlier percentile in breed
59
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ24A11_PFZ24A11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -7.49
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -3.64
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC5 z = -2.57
  • chr1:24,578,804 loading 0.0240
  • chr2:19,906,795 loading 0.0230
  • chr13:51,091,794 loading 0.0227
Ancestry reconstruction error: 0.18
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