Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ24G03_PFZ24G03, a Vizsla
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ24G03_PFZ24G03

PFZ24G03_PFZ24G03 is a Vizsla from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ24G03_PFZ24G03 in the atlas
About PFZ24G03_PFZ24G03

PFZ24G03_PFZ24G03 sits well inside the Vizsla cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ24G03_PFZ24G03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ24G03_PFZ24G03's. Click any of them to keep exploring.

  1. PFZ26D03_PFZ26D03 Vizsla 12.92
  2. PFZ29D06_PFZ29D06 Vizsla 14.63
  3. PFZ24C04_PFZ24C04 Vizsla 14.95
  4. PFZ29G06_PFZ29G06 Vizsla 16.19
  5. PFZ23D01_PFZ23D01 Vizsla 16.20
PFZ24G03_PFZ24G03's breed

PFZ24G03_PFZ24G03 sits in the Vizsla cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Vizsla 89%
  2. Golden Retriever 5%
  3. Labrador Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Vizsla.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -1.939
y 12.569
z -1.409
PCA-256 distance from breed centroid
15.76
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ24G03_PFZ24G03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC28 z = 7.77
  • chr1:23,982,151 loading 0.0270
  • chr20:38,628,243 loading 0.0270
  • chr12:42,365,450 loading 0.0269
PC30 z = 6.21
  • chr22:1,635,288 loading 0.0319
  • chr13:9,677,426 loading 0.0297
  • chr7:41,071,296 loading 0.0289
PC35 z = 3.35
  • chr3:87,605,064 loading 0.0312
  • chr29:22,312,754 loading 0.0292
  • chr30:3,709,721 loading -0.0270
Ancestry reconstruction error: 0.24
Back to the Atlas →