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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ28C02_PFZ28C02, a Canaan Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ28C02_PFZ28C02

PFZ28C02_PFZ28C02 is a Canaan Dog from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ28C02_PFZ28C02 in the atlas
About PFZ28C02_PFZ28C02

PFZ28C02_PFZ28C02 sits near the center of the Canaan Dog cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ28C02_PFZ28C02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ28C02_PFZ28C02's. Click any of them to keep exploring.

  1. Reen_Reen Canaan Dog 16.80
  2. Zik_Zik Canaan Dog 17.41
  3. Sunny_Sunny Canaan Dog 17.87
  4. Lilo_Lilo Canaan Dog 18.39
  5. Maccabre_Maccabre Canaan Dog 19.45
PFZ28C02_PFZ28C02's breed

PFZ28C02_PFZ28C02 sits in the German Shepherd cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 57%
  2. Golden Retriever 22%
  3. Labrador Retriever 21%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Canaan Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/T
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.952
y 3.239
z 0.884
PCA-256 distance from breed centroid
23.62
Outlier percentile in breed
13
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ28C02_PFZ28C02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC237 z = 2.06
  • chr18:10,316,807 loading 0.0412
  • chr18:49,993,975 loading -0.0328
  • chr4:32,494,543 loading 0.0323
PC26 z = -2.04
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC164 z = -1.99
  • chr19:16,549,845 loading 0.0354
  • chr28:2,607,542 loading -0.0326
  • chr28:1,724,663 loading 0.0325
Ancestry reconstruction error: 0.58
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