Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ30E02_PFZ30E02, a Curly Coated Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ30E02_PFZ30E02

PFZ30E02_PFZ30E02 is a Curly Coated Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ30E02_PFZ30E02 in the atlas
About PFZ30E02_PFZ30E02

PFZ30E02_PFZ30E02 sits at the edge of the Curly Coated Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ30E02_PFZ30E02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ30E02_PFZ30E02's. Click any of them to keep exploring.

  1. PFZ42G05_PFZ42G05 Curly Coated Retriever 19.55
  2. HR18_HR18 Posavski Goni 24.74
  3. PFZ35E03_PFZ35E03 Rat Terrier 25.52
  4. PFZ3C04_PFZ3C04 Village Dog Portugal 25.56
  5. HO10_HO10 Village Dog Honduras 26.13
PFZ30E02_PFZ30E02's breed

PFZ30E02_PFZ30E02 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 53%
  2. Labrador Retriever 47%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Curly Coated Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL A/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.200
y 1.274
z 2.056
PCA-256 distance from breed centroid
38.22
Outlier percentile in breed
50
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ30E02_PFZ30E02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC219 z = 2.73
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
PC220 z = -2.68
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
PC235 z = 2.30
  • chr5:7,618,997 loading 0.0371
  • chr18:10,714,022 loading 0.0318
  • chr25:27,400,046 loading 0.0312
Ancestry reconstruction error: 0.79
Back to the Atlas →