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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ42G05_PFZ42G05, a Curly Coated Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ42G05_PFZ42G05

PFZ42G05_PFZ42G05 is a Curly Coated Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ42G05_PFZ42G05 in the atlas
About PFZ42G05_PFZ42G05

PFZ42G05_PFZ42G05 is a notable Curly Coated Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ42G05_PFZ42G05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ42G05_PFZ42G05's. Click any of them to keep exploring.

  1. PFZ30E02_PFZ30E02 Curly Coated Retriever 19.55
  2. PFZ34F04_PFZ34F04 Catahoula Leopard Dog 26.53
  3. HR18_HR18 Posavski Goni 26.74
  4. FJ20_FJ20 Village Dog Fiji Viti Levu 27.09
  5. PFZ3E04_PFZ3E04 Village Dog Brazil 27.61
PFZ42G05_PFZ42G05's breed

PFZ42G05_PFZ42G05 sits in the Belgian Shepherd cluster, with genome overlap to Newfoundland, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Belgian Shepherd 41%
  2. Newfoundland 40%
  3. Golden Retriever 19%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Curly Coated Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.216
y 1.324
z 2.000
PCA-256 distance from breed centroid
39.26
Outlier percentile in breed
88
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ42G05_PFZ42G05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC220 z = -3.01
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
PC154 z = 2.86
  • chr34:1,972,619 loading 0.0431
  • chr34:1,533,247 loading 0.0397
  • chr34:2,125,452 loading 0.0365
PC196 z = 2.67
  • chr23:3,426,742 loading 0.0355
  • chr23:3,756,166 loading 0.0335
  • chr4:38,305,840 loading 0.0333
Ancestry reconstruction error: 0.79
Back to the Atlas →