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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ32A06_PFZ32A06, a Dachshund
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ32A06_PFZ32A06

PFZ32A06_PFZ32A06 is a Dachshund from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ32A06_PFZ32A06 in the atlas
About PFZ32A06_PFZ32A06

PFZ32A06_PFZ32A06 sits well inside the Dachshund cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ32A06_PFZ32A06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ32A06_PFZ32A06's. Click any of them to keep exploring.

  1. PFZ17F03_PFZ17F03 Miniature Dachshund 19.32
  2. PFZ43A01_PFZ43A01 Dachshund 19.85
  3. PFZ14F10_PFZ14F10 Dachshund 19.94
  4. PFZ32D05_PFZ32D05 Dachshund 20.03
  5. PFZ14H04_PFZ14H04 Dachshund 20.13
PFZ32A06_PFZ32A06's breed

PFZ32A06_PFZ32A06 sits in the Dachshund cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Dachshund 89%
  2. Golden Retriever 6%
  3. Labrador Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Dachshund.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 C/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 15.459
y -2.507
z 2.804
PCA-256 distance from breed centroid
21.75
Outlier percentile in breed
27
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ32A06_PFZ32A06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC42 z = -5.28
  • chr14:22,119,741 loading 0.0316
  • chr5:79,283,975 loading -0.0300
  • chr5:64,357,114 loading -0.0296
PC47 z = -4.74
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC54 z = 2.88
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
Ancestry reconstruction error: 0.46
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