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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ3E05_PFZ3E05, a Village Dog Mexico Mexico City
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ3E05_PFZ3E05

PFZ3E05_PFZ3E05 is labelled Village Dog Mexico Mexico City in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ3E05_PFZ3E05 in the atlas
About PFZ3E05_PFZ3E05
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ3E05_PFZ3E05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ3E05_PFZ3E05's. Click any of them to keep exploring.

  1. PFZ30A01_PFZ30A01 Village Dog Peru Cusco 20.95
  2. PFZ2G03_PFZ2G03 Village Dog Peru Cusco 21.42
  3. PFZ2A11_PFZ2A11 Village Dog Peru Loreto 21.60
  4. PFZ2G08_PFZ2G08 Village Dog Peru Cusco 21.64
  5. FJ20_FJ20 Village Dog Fiji Viti Levu 21.71
PFZ3E05_PFZ3E05's breed

PFZ3E05_PFZ3E05's genome decomposes mostly into German Shepherd, with additional weight on Golden Retriever, and Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 48%
  2. Golden Retriever 28%
  3. Labrador Retriever 23%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Mexico Mexico City.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.459
y 1.525
z 1.897
Top-3 principal components by |z|

The 3 PCs on which PFZ3E05_PFZ3E05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC123 z = -1.58
  • chr1:96,988,408 loading 0.0363
  • chr34:2,125,452 loading -0.0340
  • chr9:14,046,505 loading -0.0338
PC206 z = -1.58
  • chr7:42,935,741 loading 0.0386
  • chr19:34,609,563 loading -0.0356
  • chr30:22,656,587 loading 0.0321
PC210 z = -1.44
  • chr14:14,236,787 loading 0.0332
  • chr19:34,609,563 loading -0.0320
  • chr24:23,645,624 loading 0.0312
Ancestry reconstruction error: 0.59
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