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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ3H11_PFZ3H11, a Tornjak
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ3H11_PFZ3H11

PFZ3H11_PFZ3H11 is a Tornjak from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ3H11_PFZ3H11 in the atlas
About PFZ3H11_PFZ3H11
  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ3H11_PFZ3H11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ3H11_PFZ3H11's. Click any of them to keep exploring.

  1. HR97_HR97 Village Dog Croatia 20.34
  2. PFZ2C09_PFZ2C09 Village Dog Dominican Republic 21.17
  3. PFZ30A02_PFZ30A02 Village Dog Peru Cusco 21.67
  4. TU48_TU48 Village Dog Turkey Giresun 22.01
  5. PFZ2A09_PFZ2A09 Village Dog Dominican Republic 22.21
PFZ3H11_PFZ3H11's breed

PFZ3H11_PFZ3H11 sits in the German Shepherd cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 52%
  2. Golden Retriever 25%
  3. Labrador Retriever 23%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Tornjak.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL A/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.692
y 1.825
z 1.545
Top-3 principal components by |z|

The 3 PCs on which PFZ3H11_PFZ3H11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC193 z = 1.92
  • chr19:1,162,032 loading 0.0555
  • chr19:1,420,658 loading 0.0489
  • chr19:1,685,081 loading -0.0433
PC136 z = 1.79
  • chr13:1,840,654 loading 0.0379
  • chr19:3,379,845 loading -0.0360
  • chr26:3,121,537 loading -0.0358
PC185 z = 1.71
  • chr7:42,518,817 loading 0.0342
  • chr11:2,541,241 loading 0.0331
  • chr27:42,849,032 loading -0.0324
Ancestry reconstruction error: 0.63
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