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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ43C05_PFZ43C05, a Shih Tzu
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ43C05_PFZ43C05

PFZ43C05_PFZ43C05 is a Shih Tzu from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ43C05_PFZ43C05 in the atlas
About PFZ43C05_PFZ43C05

PFZ43C05_PFZ43C05 sits well inside the Shih Tzu cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ43C05_PFZ43C05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ43C05_PFZ43C05's. Click any of them to keep exploring.

  1. PFZ14G10_PFZ14G10 Shih Tzu 16.61
  2. PFZ43D12_PFZ43D12 Shih Tzu 17.03
  3. PFZ35C04_PFZ35C04 Shih Tzu 17.31
  4. PFZ34H07_PFZ34H07 Shih Tzu 17.49
  5. PFZ15G01_PFZ15G01 Shih Tzu 17.51
PFZ43C05_PFZ43C05's breed

PFZ43C05_PFZ43C05 sits in the Shih Tzu cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Shih Tzu 89%
  2. Golden Retriever 6%
  3. Labrador Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Shih Tzu.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/T
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 12.111
y -0.408
z -5.582
PCA-256 distance from breed centroid
17.23
Outlier percentile in breed
32
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ43C05_PFZ43C05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC60 z = 7.72
  • chr2:79,935,004 loading 0.0311
  • chr4:63,750,215 loading -0.0309
  • chr11:23,826,298 loading 0.0301
PC37 z = -6.59
  • chr30:33,900,950 loading 0.0365
  • chr1:31,256,526 loading 0.0299
  • chr28:38,109,009 loading 0.0284
PC61 z = -6.42
  • chr11:47,398,568 loading 0.0283
  • chr13:20,879,550 loading -0.0282
  • chr14:35,441,828 loading -0.0282
Ancestry reconstruction error: 0.21
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