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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ43E07_PFZ43E07, a Schipperke
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ43E07_PFZ43E07

PFZ43E07_PFZ43E07 is a Schipperke from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ43E07_PFZ43E07 in the atlas
About PFZ43E07_PFZ43E07

PFZ43E07_PFZ43E07 is a notable Schipperke - distinctive within the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ43E07_PFZ43E07's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ43E07_PFZ43E07's. Click any of them to keep exploring.

  1. Sci_LU1482_Sci_LU1482 Schipperke 24.77
  2. Sci_LU1481_Sci_LU1481 Schipperke 25.36
  3. Sci_LU1455_Sci_LU1455 Schipperke 25.51
  4. Sci_LU1496_Sci_LU1496 Schipperke 28.95
  5. PFZ14D08_PFZ14D08 American Eskimo Dog 30.58
PFZ43E07_PFZ43E07's breed

PFZ43E07_PFZ43E07 sits in the Schipperke cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Schipperke 72%
  2. Golden Retriever 16%
  3. Labrador Retriever 13%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Schipperke.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.423
y -3.811
z 5.487
PCA-256 distance from breed centroid
36.44
Outlier percentile in breed
75
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ43E07_PFZ43E07 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC67 z = -3.94
  • chr20:37,137,374 loading 0.0345
  • chr37:21,909,127 loading -0.0321
  • chr23:49,705,023 loading 0.0289
PC71 z = 3.80
  • chr22:1,808,281 loading 0.0402
  • chr22:2,157,682 loading 0.0366
  • chr22:2,072,452 loading 0.0364
PC253 z = 2.64
  • chr27:12,240,889 loading 0.0349
  • chr22:40,186,686 loading -0.0299
  • chr3:9,727,004 loading 0.0298
Ancestry reconstruction error: 0.56
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