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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ43G03_PFZ43G03, a Doberman Pinscher
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ43G03_PFZ43G03

PFZ43G03_PFZ43G03 is a Doberman Pinscher from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ43G03_PFZ43G03 in the atlas
About PFZ43G03_PFZ43G03

PFZ43G03_PFZ43G03 is a notable Doberman Pinscher - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ43G03_PFZ43G03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ43G03_PFZ43G03's. Click any of them to keep exploring.

  1. PFZ15A04_PFZ15A04 Doberman Pinscher 16.11
  2. PFZ38H08_PFZ38H08 Doberman Pinscher 16.76
  3. PFZ44C02_PFZ44C02 Doberman Pinscher 16.95
  4. PFZ15H12_PFZ15H12 Doberman Pinscher 17.12
  5. PFZ43D03_PFZ43D03 Doberman Pinscher 17.46
PFZ43G03_PFZ43G03's breed

PFZ43G03_PFZ43G03 sits in the Doberman Pinscher cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Doberman Pinscher 84%
  2. Labrador Retriever 9%
  3. Golden Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Doberman Pinscher.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/A
LCORL A/A
STC2 C/C
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 T/T
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.937
y 0.953
z 11.283
PCA-256 distance from breed centroid
38.08
Outlier percentile in breed
86
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ43G03_PFZ43G03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC14 z = -5.82
  • chr2:9,971,173 loading 0.0294
  • chr24:32,514,754 loading -0.0259
  • chr24:20,979,390 loading -0.0251
PC15 z = 4.53
  • chr27:9,604,099 loading 0.0251
  • chr9:58,501,670 loading -0.0250
  • chr9:46,847,361 loading 0.0246
PC144 z = 3.69
  • chr17:4,173,842 loading 0.0340
  • chr34:2,125,452 loading 0.0333
  • chr17:4,128,965 loading 0.0327
Ancestry reconstruction error: 0.49
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