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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ44H04_PFZ44H04, a Poodle
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ44H04_PFZ44H04

PFZ44H04_PFZ44H04 is a Poodle from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ44H04_PFZ44H04 in the atlas
About PFZ44H04_PFZ44H04

PFZ44H04_PFZ44H04 sits well inside the Poodle cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ44H04_PFZ44H04's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ44H04_PFZ44H04's. Click any of them to keep exploring.

  1. StP_GT373_StP_GT373 Poodle 19.76
  2. StP_GT374_StP_GT374 Poodle 20.03
  3. PFZ12C04_PFZ12C04 Poodle 20.08
  4. PFZ15F08_PFZ15F08 Poodle 20.69
  5. PFZ44B08_PFZ44B08 Poodle 20.80
PFZ44H04_PFZ44H04's breed

PFZ44H04_PFZ44H04 sits in the Poodle cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Poodle 88%
  2. Labrador Retriever 7%
  3. Golden Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Poodle.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 14.012
y 0.966
z -1.226
PCA-256 distance from breed centroid
23.06
Outlier percentile in breed
49
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ44H04_PFZ44H04 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC64 z = -8.03
  • chr8:38,372,734 loading 0.0317
  • chr23:20,107,050 loading 0.0304
  • chr23:19,874,668 loading -0.0292
PC62 z = 6.81
  • chr22:2,157,682 loading 0.0652
  • chr22:2,367,358 loading 0.0634
  • chr22:2,271,992 loading 0.0625
PC60 z = 5.14
  • chr2:79,935,004 loading 0.0311
  • chr4:63,750,215 loading -0.0309
  • chr11:23,826,298 loading 0.0301
Ancestry reconstruction error: 0.31
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