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CanVAS Shannon · Founder
Cosmic medallion portrait of Box_LU128_Box_LU128, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Box_LU128_Box_LU128

Box_LU128_Box_LU128 is a Boxer from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See Box_LU128_Box_LU128 in the atlas
About Box_LU128_Box_LU128

Box_LU128_Box_LU128 is a notable Boxer - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Box_LU128_Box_LU128's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Box_LU128_Box_LU128's. Click any of them to keep exploring.

  1. Box_LU134_Box_LU134 Boxer 18.03
  2. PFZ24B11_PFZ24B11 Boxer 18.06
  3. PFZ24C12_PFZ24C12 Boxer 18.48
  4. PFZ29E03_PFZ29E03 Boxer 19.39
  5. PFZ24C09_PFZ24C09 Boxer 19.71
Box_LU128_Box_LU128's breed

Box_LU128_Box_LU128 sits in the Boxer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 85%
  2. Labrador Retriever 8%
  3. Golden Retriever 7%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.476
y 0.293
z -0.717
PCA-256 distance from breed centroid
33.95
Outlier percentile in breed
88
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Box_LU128_Box_LU128 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -5.89
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC148 z = 4.15
  • chr6:30,769,727 loading 0.0436
  • chr1:62,992,483 loading -0.0356
  • chr6:30,876,588 loading -0.0355
PC120 z = 3.80
  • chr3:1,222,422 loading 0.0435
  • chr34:3,128,578 loading 0.0397
  • chr34:1,919,265 loading -0.0396
Ancestry reconstruction error: 0.38
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