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CanVAS Biasoli · Founder
Cosmic medallion portrait of cHD15_60_cHD15_60, a Labrador Or Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD15_60_cHD15_60

cHD15_60_cHD15_60 is labelled Labrador Or Golden Retriever in the Biasoli cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See cHD15_60_cHD15_60 in the atlas
About cHD15_60_cHD15_60

cHD15_60_cHD15_60 is a strong genetic outlier within the Labrador Or Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
cHD15_60_cHD15_60's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD15_60_cHD15_60's. Click any of them to keep exploring.

  1. PFZ30C03_PFZ30C03 Village Dog Peru Ica 26.39
  2. PFZ2F05_PFZ2F05 Peruvian Inca Orchid 28.87
  3. PFZ25F02_PFZ25F02 Mix 28.95
  4. PFZ11A12_PFZ11A12 Bulldog 29.35
  5. PFZ3H03_PFZ3H03 Village Dog Brazil 29.77
cHD15_60_cHD15_60's breed

cHD15_60_cHD15_60's genome decomposes mostly into Boxer, with additional weight on Labrador Retriever, German Shepherd, and Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 40%
  2. Labrador Retriever 24%
  3. German Shepherd 23%
  4. Golden Retriever 14%
Source

From the CanVAS (Biasoli cohort) . Breed-page reference: Labrador Or Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.594
y 1.692
z 1.753
PCA-256 distance from breed centroid
48.20
Outlier percentile in breed
94
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD15_60_cHD15_60 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC212 z = 1.87
  • chr28:326,614 loading 0.0378
  • chr2:50,919,591 loading 0.0372
  • chr28:1,791,942 loading -0.0335
PC6 z = -1.69
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC218 z = -1.61
  • chr7:62,094,557 loading 0.0330
  • chr17:4,233,511 loading -0.0324
  • chr28:21,567,516 loading 0.0320
Ancestry reconstruction error: 0.63
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