Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grlsSA1TUEEE, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsSA1TUEEE

GRLS_grlsSA1TUEEE is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsSA1TUEEE in the atlas
About GRLS_grlsSA1TUEEE

GRLS_grlsSA1TUEEE is a strong genetic outlier within the Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsSA1TUEEE's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsSA1TUEEE's. Click any of them to keep exploring.

  1. GRLS_grlsMXRC2E11 Golden Retriever 35.88
  2. GRLS_grlsJ2YZQMCC Golden Retriever 36.97
  3. PILOT_grlsNDQY5Y55 Golden Retriever 37.43
  4. GRLS_grlsW140M811 Golden Retriever 38.01
  5. PILOT_grlsPO60V0HH Golden Retriever 38.12
GRLS_grlsSA1TUEEE's breed

GRLS_grlsSA1TUEEE sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.399
y 9.400
z 9.221
PCA-256 distance from breed centroid
44.76
Outlier percentile in breed
91
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsSA1TUEEE scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC79 z = -4.17
  • chr3:7,389,779 loading 0.0444
  • chr3:6,720,531 loading -0.0378
  • chr3:6,392,552 loading -0.0378
PC82 z = 3.46
  • chr1:68,097,128 loading 0.0396
  • chr1:69,785,342 loading -0.0385
  • chr1:70,040,058 loading 0.0383
PC68 z = -3.23
  • chr22:725,951 loading 0.0351
  • chr22:1,996,400 loading -0.0345
  • chr22:902,803 loading 0.0335
Ancestry reconstruction error: 0.65
Back to the Atlas →