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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ11B05_PFZ11B05, a German Shorthaired Pointer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ11B05_PFZ11B05

PFZ11B05_PFZ11B05 is a German Shorthaired Pointer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ11B05_PFZ11B05 in the atlas
About PFZ11B05_PFZ11B05

PFZ11B05_PFZ11B05 sits near the center of the German Shorthaired Pointer cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ11B05_PFZ11B05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ11B05_PFZ11B05's. Click any of them to keep exploring.

  1. PFZ11B12_PFZ11B12 German Shorthaired Pointer 18.76
  2. PFZ10H04_PFZ10H04 German Shorthaired Pointer 18.77
  3. PFZ11C11_PFZ11C11 German Shorthaired Pointer 19.14
  4. PFZ10G04_PFZ10G04 German Shorthaired Pointer 19.33
  5. PFZ10A05_PFZ10A05 German Shorthaired Pointer 19.72
PFZ11B05_PFZ11B05's breed

PFZ11B05_PFZ11B05 sits in the Vizsla cluster, with genome overlap to Gordon Setter, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Vizsla 45%
  2. Gordon Setter 36%
  3. Golden Retriever 20%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: German Shorthaired Pointer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/A
LCORL A/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.329
y 0.182
z 1.850
PCA-256 distance from breed centroid
13.17
Outlier percentile in breed
8
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ11B05_PFZ11B05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC252 z = 3.03
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
PC163 z = -2.91
  • chr34:1,919,265 loading 0.0369
  • chr34:2,440,834 loading -0.0368
  • chr34:1,346,136 loading 0.0366
PC215 z = -2.63
  • chr19:7,211,690 loading 0.0376
  • chr19:7,271,993 loading 0.0341
  • chr27:40,183,759 loading 0.0317
Ancestry reconstruction error: 0.72
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