Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ30B02_PFZ30B02, a Village Dog Peru Cusco
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ30B02_PFZ30B02

PFZ30B02_PFZ30B02 is labelled Village Dog Peru Cusco in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ30B02_PFZ30B02 in the atlas
About PFZ30B02_PFZ30B02

PFZ30B02_PFZ30B02 sits well inside the Village Dog Peru Cusco cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ30B02_PFZ30B02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ30B02_PFZ30B02's. Click any of them to keep exploring.

  1. PFZ2F03_PFZ2F03 Village Dog Peru Cusco 20.04
  2. PFZ2C08_PFZ2C08 Peruvian Inca Orchid 20.28
  3. PFZ2H01_PFZ2H01 Village Dog Peru Puno 20.60
  4. PFZ2E12_PFZ2E12 Village Dog Peru Loreto 20.64
  5. PFZ30A02_PFZ30A02 Village Dog Peru Cusco 20.66
PFZ30B02_PFZ30B02's breed

PFZ30B02_PFZ30B02's genome decomposes mostly into German Shepherd, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 69%
  2. Golden Retriever 31%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Peru Cusco.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.489
y 1.502
z 1.743
PCA-256 distance from breed centroid
15.35
Outlier percentile in breed
40
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ30B02_PFZ30B02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC222 z = -2.36
  • chr12:60,458,843 loading 0.0369
  • chr13:14,089,127 loading 0.0363
  • chr34:29,222,122 loading -0.0309
PC207 z = 1.69
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
PC247 z = 1.65
  • chr3:7,959,527 loading 0.0294
  • chr16:43,038,278 loading -0.0293
  • chr19:17,213,086 loading 0.0288
Ancestry reconstruction error: 0.61
Back to the Atlas →