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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ35A11_PFZ35A11, a Rat Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ35A11_PFZ35A11

PFZ35A11_PFZ35A11 is a Rat Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ35A11_PFZ35A11 in the atlas
About PFZ35A11_PFZ35A11

PFZ35A11_PFZ35A11 sits at the edge of the Rat Terrier cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ35A11_PFZ35A11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ35A11_PFZ35A11's. Click any of them to keep exploring.

  1. PFZ35G04_PFZ35G04 Rat Terrier 21.87
  2. CHI_28183_CHI_28183 Chihuahua 22.12
  3. PFZ16G08_PFZ16G08 Toy Fox Terrier 22.13
  4. PFZ31A05_PFZ31A05 Mix 22.17
  5. PFZ35A05_PFZ35A05 Rat Terrier 22.57
PFZ35A11_PFZ35A11's breed

PFZ35A11_PFZ35A11 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 59%
  2. Labrador Retriever 41%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Rat Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL A/G
STC2 C/C
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.246
y 1.152
z 2.380
PCA-256 distance from breed centroid
17.63
Outlier percentile in breed
67
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ35A11_PFZ35A11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC245 z = -2.05
  • chr5:79,585,745 loading 0.0313
  • chr14:5,105,246 loading 0.0300
  • chr24:4,166,647 loading -0.0289
PC218 z = 1.93
  • chr7:62,094,557 loading 0.0330
  • chr17:4,233,511 loading -0.0324
  • chr28:21,567,516 loading 0.0320
PC189 z = 1.91
  • chr11:28,721,751 loading 0.0412
  • chr14:3,689,618 loading -0.0355
  • chr11:17,928,935 loading -0.0339
Ancestry reconstruction error: 0.62
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