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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ23B11_PFZ23B11, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ23B11_PFZ23B11

PFZ23B11_PFZ23B11 is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ23B11_PFZ23B11 in the atlas
About PFZ23B11_PFZ23B11

PFZ23B11_PFZ23B11 is a notable Boxer - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ23B11_PFZ23B11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ23B11_PFZ23B11's. Click any of them to keep exploring.

  1. PFZ24B11_PFZ24B11 Boxer 22.13
  2. PFZ24C09_PFZ24C09 Boxer 23.20
  3. B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 Boxer 23.41
  4. PFZ29E03_PFZ29E03 Boxer 23.81
  5. Box_LU128_Box_LU128 Boxer 24.38
PFZ23B11_PFZ23B11's breed

PFZ23B11_PFZ23B11 sits in the Boxer cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 85%
  2. Golden Retriever 8%
  3. Labrador Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.514
y 0.287
z -0.794
PCA-256 distance from breed centroid
31.23
Outlier percentile in breed
85
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ23B11_PFZ23B11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -5.70
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC133 z = -3.07
  • chr6:3,210,008 loading 0.0329
  • chr28:1,791,942 loading 0.0327
  • chr28:1,882,913 loading 0.0326
PC7 z = -2.69
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
Ancestry reconstruction error: 0.33
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