Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ30F01_PFZ30F01, a Village Dog Peru Arequipa
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ30F01_PFZ30F01

PFZ30F01_PFZ30F01 is labelled Village Dog Peru Arequipa in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ30F01_PFZ30F01 in the atlas
About PFZ30F01_PFZ30F01

PFZ30F01_PFZ30F01 sits near the center of the Village Dog Peru Arequipa cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ30F01_PFZ30F01's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ30F01_PFZ30F01's. Click any of them to keep exploring.

  1. PFZ2D03_PFZ2D03 Village Dog Peru Ica 20.14
  2. PFZ1F10_PFZ1F10 Peruvian Inca Orchid 20.15
  3. PFZ1H12_PFZ1H12 Village Dog Peru Cusco 20.45
  4. PFZ35E05_PFZ35E05 Bearded Collie 20.57
  5. CO32_CO32 Village Dog Colombia 20.73
PFZ30F01_PFZ30F01's breed

PFZ30F01_PFZ30F01's genome decomposes mostly into German Shepherd, with additional weight on Golden Retriever, and Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 62%
  2. Golden Retriever 21%
  3. Labrador Retriever 17%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Peru Arequipa.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.311
y 1.725
z 1.548
PCA-256 distance from breed centroid
15.50
Outlier percentile in breed
0
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ30F01_PFZ30F01 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC227 z = 1.69
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC155 z = -1.49
  • chr3:3,559,803 loading 0.0324
  • chr6:3,540,503 loading -0.0319
  • chr15:3,475,065 loading 0.0316
PC242 z = 1.25
  • chr13:35,426,269 loading 0.0319
  • chr12:6,934,625 loading -0.0307
  • chr31:14,181,674 loading 0.0294
Ancestry reconstruction error: 0.58
Back to the Atlas →