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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grls43eed6ff, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grls43eed6ff

Oldies_grls43eed6ff is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grls43eed6ff in the atlas
About Oldies_grls43eed6ff

Oldies_grls43eed6ff sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Oldies_grls43eed6ff's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grls43eed6ff's. Click any of them to keep exploring.

  1. PFZ7B06_PFZ7B06 Golden Retriever 26.20
  2. GRLS_grlsJZM9EHDD Golden Retriever 26.95
  3. GRLS_grlsG9A3FG00 Golden Retriever 27.37
  4. GRLS_grlsTCV97AGG Golden Retriever 28.67
  5. Oldies_grls1b975853 Golden Retriever 29.18
Oldies_grls43eed6ff's breed

Oldies_grls43eed6ff sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 73%
  2. Labrador Retriever 27%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.786
y 10.613
z 7.237
PCA-256 distance from breed centroid
37.90
Outlier percentile in breed
67
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grls43eed6ff scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC113 z = 3.85
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
PC181 z = 3.17
  • chr19:2,539,757 loading 0.0344
  • chr3:6,392,552 loading -0.0326
  • chr6:16,157,160 loading 0.0301
PC200 z = 3.07
  • chr26:9,892,015 loading 0.0403
  • chr19:3,081,516 loading 0.0393
  • chr26:3,675,581 loading 0.0362
Ancestry reconstruction error: 0.66
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