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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ3F03_PFZ3F03, a Village Dog Portugal
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ3F03_PFZ3F03

PFZ3F03_PFZ3F03 is labelled Village Dog Portugal in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ3F03_PFZ3F03 in the atlas
About PFZ3F03_PFZ3F03

PFZ3F03_PFZ3F03 is a notable Village Dog Portugal - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ3F03_PFZ3F03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ3F03_PFZ3F03's. Click any of them to keep exploring.

  1. PFZ11C02_PFZ11C02 German Shorthaired Pointer 21.12
  2. PFZ11E11_PFZ11E11 German Shorthaired Pointer 21.90
  3. PFZ11B12_PFZ11B12 German Shorthaired Pointer 22.21
  4. PFZ11B05_PFZ11B05 German Shorthaired Pointer 22.36
  5. PFZ10H04_PFZ10H04 German Shorthaired Pointer 22.53
PFZ3F03_PFZ3F03's breed

PFZ3F03_PFZ3F03's genome decomposes mostly into Vizsla, with additional weight on Belgian Shepherd, Golden Retriever, and Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Vizsla 35%
  2. Belgian Shepherd 32%
  3. Golden Retriever 19%
  4. Labrador Retriever 14%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Portugal.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.366
y 0.410
z 1.861
PCA-256 distance from breed centroid
18.34
Outlier percentile in breed
89
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ3F03_PFZ3F03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC124 z = -1.93
  • chr15:20,177,951 loading 0.0387
  • chr13:4,444,829 loading 0.0366
  • chr15:20,737,839 loading -0.0362
PC163 z = -1.68
  • chr34:1,919,265 loading 0.0369
  • chr34:2,440,834 loading -0.0368
  • chr34:1,346,136 loading 0.0366
PC252 z = 1.64
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
Ancestry reconstruction error: 0.65
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